The Bad Batch and Omega seek refuge on Saleucami with clone deserter Cut Lawquane, who tells them about the inhibitor chips which programmed the regular clones and Crosshair to be loyal to the Empire after Order 66. With increased military presence from the Empire, Cut plans to escape with his family, but they discover that newly introduced chain codes are needed to book public transport. Knowing Cut would be arrested if he tried to get one, Tech and Echo steal some chain codes, and Omega helps deliver them to Cut and his family in time for them to board the transport. Hunter attempts to send Omega with Cut as he thinks she needs a family, but she decides to stay with the Bad Batch.
Clone Force 99, the elite and experimental Clones of the Bad Batch, find their way in a rapidly changing galaxy in the immediate aftermath of the Clone Wars. Members of Bad Batch - a unique squad of clones who vary genetically from their brothers in the Clone Army - each possess a singular exceptional skill that makes them extraordinarily effective soldiers and a formidable crew.